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Organized Workshops and Lectures

Workshop: “Farseer-NMR: automatic treatment, analysis and plotting of large scale, multi-variable BioNMR data – knowledge exchange within the community.” 2018. NMR Groups at Utrecht University, Utrecht, The Netherlands. Hosted by: Dr. Hugo van Ingen. Link to presentation.

Workshop: “Farseer-NMR: automatic treatment, analysis and plotting of large scale, multi-variable BioNMR data”. 2018. Parc Cientific de Barcelona, CCiTUB, Universitat de Barcelona, Spain. Link to presentation.

Workhop: “Farseer-NMR: automatic treatment, analysis and plotting of large scale, multi-variable BioNMR data”. 9th May 2018, Dr. Eurico J. Cabrita Group, Nuclear Magnetic Resonance Spectroscopy Facility, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Portugal.

Hands-on Session: “2D- and 3D-NMR Processing and Analysis with introduction to CCPNMR Analysis Suite v2.4”. Workshop NMR FOCUS entitled: “NMR in health and disease: From Protein-Ligand Interactions to Small Molecules in Tissues”, 7th-11th of May 2018. PTNMR, University of Coimbra, Portugal.

Lecture: “Chemical Shift Perturbation – Protein Based Studies”. Workshop NMR FOCUS entitled: “NMR in health and disease: From Protein-Ligand Interactions to Small Molecules in Tissues”, 7th-11th of May 2018. PTNMR, University of Coimbra, Portugal.

Seminar and Hands-on Session: “Farseer-NMR: automatic treatment, analysis and plotting of large scale, multi-variable BioNMR data”. Workshop NMR FOCUS entitled: “NMR in health and disease: From Protein-Ligand Interactions to Small Molecules in Tissues”, 7th-11th of May 2018. PTNMR, University of Coimbra, Portugal.

Workshop: “Introduction and hands-on.-approach on Farseer-NMR Software”. 2017. CIC bioGUNE Institute of the Bizkaia Technology Park and the University of Basque Country, Spain.

Oral communications

Open seminar: “Cis-trans proline isomers and ligand binding in the catalytic domain of Calcineurin”.  2018. RMBLab, Protein Biophysical Chemistry Group, University of Coimbra, Portugal.

«The concept of Farseer-NMR: automatic treatment and plotting of lage-scale NMR titration data”. 2017. Barcelona Biomed Seminars, Parc Scientific de la Universitat de Barcelona, Spain. Link to presentation.

“Analysis of Calcineurin’s structure and conformational changes via methionine labelling NMR spectroscopy.” 2016. Barcelona Biomed Seminars, Parc Scientific de la Universitat de Barcelona, Spain.

“On the ‘tectonics’ of MMP-1 catalyzed collagenolysis: joint use of paramagnetic NMR and computational tools”. 2014. Barcelona Biomed Seminars, Parc Scientific de la Universitat de Barcelona, Spain.

“Joint use of NMR and bioinformatic tools to unveil the dynamics and the ‘tectonic’ enzymatic mechanism of MMP-1”. 2013. EJIBCE Oporto, Portugal.

“MMP-1: intradomain mobility and substract interaction.” 2013. As visiting researcher at the NMR Spectroscopy Research Group, Utrech University, The Netherlands.

“Molecular Biology preparation of paramagnetic equipped MMP-1”. 2012. Ph.D. Day 3, University of Florence, Italy.

“Characterizing MMP-1 Internal Dynamics”. 2011. IX Annual Meeting of CNC – Center for Neuroscience and Cell Biology, Coimbra, Portugal.

Posters (own and participations)

«Methionine renaissance: computing methyl NMR assignments from X-ray structures». ISMAR/EUROMAR Joint Conference 2019, Berlin, Germany. Abstract.

“pdb-tools: a swiss army knife for molecular structures”. ISMB/ECCB 2019, Basel, Switzerland. Presented by Dr. João Rodrigues. «RCSB PDB Poster Award«. F1000 poster publication: https://f1000research.com/posters/8-1173

«Farseer-NMR: a software suite for automatic treatment, analysis and plotting of large and multivariable datasets of bioNMR peaklists». 2018. VIII Ibero-American NMR Meeting. Lisbon, Portugal. Link to poster.

“Automated NMR Data treatment of simple and complex experimental datasets”. 2017. CECAM Workshop: “Disordered protein segments: revisiting the structure-function paradigm”, Paris, France. Link to poster.

“Fuzzy intramolecular interactions in Src family kinases”. 2017. EUROMAR 2017, Warsaw, Poland. Presented by Dr. Miquel Pons.

“Farseer – Automatic treatment, calculation and plotting of NMR data. Reducing weeks to seconds”. First All Hands Meeting of iNEXT (iNEXT AHM 2016), Alcalá de Henares, Spain. Link to poster.

«A python tool to automatically treat, calculate and plot NMR-derived peaklists data”. 2016. 16th CCPN / CCPBioSim joint conference, Buxton, United Kingdom.

“A python tool to instantly treat, calculate and plot NMR-derived peaklists data”. 2016. 8th GERMN/5th Iberian NMR Meeting, Valencia, Spain. Awarded Travel Fellowship from GERMN (RSEQ).

“A conserved aromatic-residue code shapes the intrinsically disordered Unique domain of c-Src”. 2016. 16th CCPN / CCPBioSim joint conference, Buxton, United Kingdom. Presented by Miguel  Arbesú.

“A conserved aromatic-residue code shapes the intrinsically disordered Unique domain of c-Src”. EUROMAR 2016, Aarhus, Denmark. Presented by Miguel Arbesú.

“Transient contacts in the instrinsically Disordered Unique Domain of c-Src”. 2015. Chemical Complexity & Biology, Strasbourg, France. Presented by Miguel Arbesú.

“A C2HC zinc finger is essential for the activity of the RING ubiquitin ligase RNG125”. 2015. EMBO Conference “Ubiquitin and ubiquitin-like modifiers: from molecular mechanisms to human diseases”, Cavtat, Croatia.

“Transient contacts in the instrinsically Disordered Unique Domain of c-Src”. 2015. VII GERMN Biennal Meeting / IV Iberian NMR Meeting / VI Iberoamerican NMR Meeting, Alcalá de Henares, Spain. Presented by Miguel Arbesú.

“Paramagnetic analysis of collagenolysis by matrix metalloproteinase-1 (MMP-1)”. 2014. EMBO Workshop – Magnetic Resonance for cellular structural biology, Grosseto, Italy.

“Interactions of an essential Zn-finger in the ubiquitin ligase RNF125”. 2014. 4th Annual User group Meeting of BioNMR, Warsaw, Poland.

“The interdomain mobility of MMP-1 and its mechanism of interaction with a collagen analogue explored by paramagnetic NMR”. 2013. 5th CAPRI Evaluation Meeting, 17-19 April, Utrecht, The Netherlands.

“Analysis of conformational heterogeneity in multidomain enzymes: the prologue of the collagenolysis mechanism”. 2012. IV Ibero-American NMR Meeting – VI GERMN Bienal Meeting – III Iberian NMR Meeting, Aveiro, Portugal.

“3D-view of MMP-1 conformational heterogeneity in solution: the prologue of the collagenolysis mechanism”. 2012. 12th Chianti/INSTRUCT Workshop on BioNMR. Electron and Nuclear Relaxation for Structural Biology, Montecatini Terme, Italy.

“3D-view of MMP-1 conformational heterogeneity in solution: the prologue of the collagenolysis mechanism”. 2012. Breakthroughs in NMR of Structural Biology – 2nd BioNMR Annual User Meeting, Portoroz, Slovenia.

“3D-view of MMP-1 conformational heterogeneity in solution: the prologue to the collagenolysis mechanism”. 2012. XXVth International Conference on Mangetic Resonance in Biological Systems, Lyon, France.

“Lanthanide binding CLaNP-5.2 for NMR of proteins: exploring PCS and RDCs in MMP-1 internal dynamics”. 2011. BioNMR and EAST-NMR Annual User Meeting, Brno, Czech Republic.

“Interaction of Ln3+-based MRI contrast agents with HSA using Saturation Transfer Difference NMR Techniques”. Joint EUROMAR 2010 and 17th ISMAR conference / Worldwide Magnetic Resonance conference, Florence, Italy.

“Study of the interaction of La3+ complexes of DOTA/DTPA-glycoconjugates with RCA120 using the High Resolution Saturation Transfer Difference (STD) NMR technique”. 2009. COST Chemistry D38 “Metal Based Systems for Molecular Imaging Applications”, Warsaw, Poland.

“Study of the interaction of Ln3+ complexes of BOPTA or DTPA-cholate with HSA and of DOTA/DTPA-glycoconjugates with RCA120 using the High Resolution Saturation Transfer Difference (STD) NMR technique”. 2008. IV Reunión Bienal del GERM-I Reunión Iberica de RMN, Sevilla, Spain.